A Scalable Method for Analysis and Display of DNA Sequences

…studying evolutionary processes based on DNA data. To download zip files containing MatLab code and datasets utilized in this paper, select the following links: PLoS_ThreeGroups_v1_2.zip (updated March 2010) PLoS_Bird_Analysis_v1_2.zip (updated March 2010)…

eDNA seasonal fish abundance study

Mark Stoeckle, together with co-authors Lyubov Soboleva (Hunter College) and Zachary Charlop-Powers (Rockefeller University), update their 2017 paper “Aquatic environmental DNA detects seasonal fish abundance and habitat preference in an…

John Steele

…this website https://hughsteele-public.sharepoint.com/ John and Jesse Ausubel co-authored the 1993 paper Flat Organizations for Earth Sciences. John’s insights were crucial to the early definition of the Census of Marine Life…

Forests, Farms, and Materials

…make paper.  Fires, saws, and axes have cleared about half of the original forestland, and some forest, though not all, has been replaced.  Some analysts warn that within decades, the…

Nature Rebounds or Return of Nature

The Return of Nature, a lightly edited version of Jesse Ausubel’s Nature Rebounds SALT talk, has been published in The Breakthrough Journal. A pdf version of the paper with more…

“Foresters and DNA” posted

We post “Foresters and DNA“, a version of the forthcoming paper by Ausubel, Wernick, and Waggoner based on Jesse’s Keynote address to the Duke U. Forest Genomics conference in November…

Two CoML reports

…which Jesse had the thrill of joining for its final week, are recounted in a press release and images. The paper in Science magazine by Boris Worm and Ransom Myers…

Animal species and mitochondria

We post to BioRXiv, the pre-print server for biology: Why Should Mitochondria Define Species? Mark Y. Stoeckle, David S. Thaler Comments on the paper are most welcome.The study is grounded…