One biodiversity database to the next

Jumping between biodiversity databases is getting easier. For example, typing in “Atlantic cod” at Ocean Biogeographic Information System (OBIS) takes you to a Gadus morhua species page summarizing 616,444 records, a zoomable map of its geographic range based on specimen collection locations, and direct links to G. morhua pages in other databases, including, for example, Barcode of Life (BOLD), Encyclopedia of Life (EOL), Catalog of Life, World Register of Marine Species (WorMS), and Google images, among others. Having all that, inspired by Matt Damon’s character in The Bourne Ultimatum, we want to take more leaps–perhaps to G. morhua pages in Arkive, Biodiversity Heritage Library, FishBase, and/or GenBank?

Something new is having links to Encylopedia of Life species pages embedded in research articles (so far in some papers in PLoS ONE; for an example, see shark names in Ward-Paige et al 2010 PLoS ONE). Having direct links to literature sources is a wonderful enhancement of research articles, and I believe that species name links will be equally valuable, particularly for biodiversity literature, so I hope this catches on. Species name links have potential to increase the audience and impact of research papers, since many otherwise interested persons will not recognize scientific names or will be entirely unfamiliar with the organisms being studied.

1 thought on “One biodiversity database to the next

  1. Yes, this is really important to include the species name apart from the scientific names only, as it is difficult for the otherwise generally interested people and readers to take the full advantage of bioversity literature. However, similarly this is also true that providing some species name is nearly impossible as the scientific name is all that they are identified with, for example, Synoicum castellatum. Thanks for sharing.

Leave a Reply