NYC/NJ Aquatic Vertebrate Environmental DNA (eDNA) Project

Contact: Mark Stoeckle mark.stoeckle@rockefeller.edu Site updated April 2017

Following fish migration NYC Marine survey NYC Central Park eDNA methods

Paper published April 2017! Stoeckle MY, Soboleva L, Charlop-Powers Z. Aquatic environmental DNA detects seasonal fish abundance and habitat preference in an urban estuary. PLOS ONE: e0175186 link to open access article

Local contacts

American Museum of Natural History (George Amato, Stephen Gaughran)

College of Staten Island, CUNY (Eugenia Naro-Maciel, Seth Wollney)

Fordham University (Evon Hekkala)

Laboratory of Genetically Encoded Small Molecules, Rockefeller University (Seth Brady, Zach Charlop-Powers)

New Jersey Sea Grant Consortium

NOAA National Marine Fisheries Service, Sandy Hook, NJ

Wildlife Conservation Society (Howard Rosenbaum)

York College, CUNY (Elizabeth Alter)

About this site

This web site is an outgrowth of the Taxonomy, DNA, and Barcode of Life meeting held at Banbury Center, Cold Spring Harbor Laboratory, September 9-12, 2003. It is designed and managed by Mark Stoeckle, Perrin Meyer, and Jason Yung at the Program for the Human Environment (PHE) at The Rockefeller University.

About the Program for the Human Environment

The involvement of the Program for the Human Environment in DNA barcoding dates to Jesse Ausubel's attendance in February 2002 at a conference in Nova Scotia organized by the Canadian Center for Marine Biodiversity. At the conference, Paul Hebert presented for the first time his concept of large-scale DNA barcoding for species identification. Impressed by the potential for this technology to address difficult challenges in the Census of Marine Life, Jesse agreed with Paul on encouraging a conference to explore the contribution taxonomy and DNA could make to the Census as well as other large-scale terrestrial efforts. In his capacity as a Program Director of the Sloan Foundation, Jesse turned to the Banbury Conference Center of Cold Spring Harbor Laboratory, whose leader Jan Witkowski prepared a strong proposal to explore both the scientific reliability of barcoding and the processes that might bring it to broad application. Concurrently, PHE researcher Mark Stoeckle began to work with the Hebert lab on analytic studies of barcoding in birds. Our involvement in barcoding now takes 3 forms: assisting the organizational development of the Consortium for the Barcode of Life and the Barcode of Life Initiative; contributing to the scientific development of the field, especially by studies in birds, and contributing to public understanding of the science and technology of barcoding and its applications through improved visualization techniques and preparation of brochures and other broadly accessible means, including this website. While the Sloan Foundation continues to support CBOL through a grant to the Smithsonian Institution, it does not provide financial support for barcoding research itself or support to the PHE for its research in this field.